The modification of the production of $J/\psi$, $\psi(\mathrm{2S})$, and $\mit{\Upsilon}(n\mathrm{S})$ ($n = 1, 2, 3$) in $p$+Pb collisions with respect to their production in $pp$ collisions has been studied. The $p$+Pb and $pp$ datasets used in this paper correspond to integrated luminosities of $28$ $\mathrm{nb}^{-1}$ and $25$ $\mathrm{pb}^{-1}$ respectively, collected in 2013 and 2015 by the ATLAS detector at the LHC, both at a centre-of-mass energy per nucleon pair of 5.02 TeV. The quarkonium states are reconstructed in the dimuon decay channel. The yields of $J/\psi$ and $\psi(\mathrm{2S})$ are separated into prompt and non-prompt sources. The measured quarkonium differential cross sections are presented as a function of rapidity and transverse momentum, as is the nuclear modification factor, $R_{p\mathrm{Pb}}$ for $J/\psi$ and $\mit{\Upsilon}(\mathrm{1S})$. No significant modification of the $J/\psi$ production is observed while $\mit{\Upsilon}(\mathrm{1S})$ production is found to be suppressed at low transverse momentum in $p$+Pb collisions relative to $pp$ collisions. The production of excited charmonium and bottomonium states is found to be suppressed relative to that of the ground states in central $p$+Pb collisions.

The polarisation of prompt $\psi(2S)$ mesons is measured by performing an angular analysis of $\psi(2S)\rightarrow \mu^{+} \mu^{-}$ decays using proton-proton collision data, corresponding to an integrated luminosity of 1.0 fb$^{-1}$, collected by the LHCb detector at a centre-of-mass energy of 7 TeV. The polarisation is measured in bins of transverse momentum $p_\mathrm{T}$ and rapidity $y$ in the kinematic region $3.5<p_\mathrm{T}<15$ GeV$/c$ and $2.0<y<4.5$, and is compared to theoretical models. No significant polarisation is observed.

The prompt and non-prompt production cross-sections for $\psi(2S)$ mesons are measured using 2.1 fb$^{-1}$ of $pp$ collision data at a centre-of-mass energy of 7 TeV recorded by the ATLAS experiment at the LHC. The measurement exploits the $\psi(2S)\to J/\psi(\to\mu^+\mu^-)\pi^+\pi^-$ decay mode, and probes $\psi(2S)$ mesons with transverse momenta in the range $10\leq p_T<100$ GeV and rapidity $|y|<2.0$. The results are compared to other measurements of $\psi(2S)$ production at the LHC and to various theoretical models for prompt and non-prompt quarkonium production.

A measurement of the J/psi and psi(2S) production cross sections in pp collisions at sqrt(s)=7 TeV with the CMS experiment at the LHC is presented. The data sample corresponds to an integrated luminosity of 37 inverse picobarns. Using a fit to the invariant mass and decay length distributions, production cross sections have been measured separately for prompt and non-prompt charmonium states, as a function of the meson transverse momentum in several rapidity ranges. In addition, cross sections restricted to the acceptance of the CMS detector are given, which are not affected by the polarization of the charmonium states. The ratio of the differential production cross sections of the two states, where systematic uncertainties largely cancel, is also determined. The branching fraction of the inclusive B to psi(2S) X decay is extracted from the ratio of the non-prompt cross sections to be: BR(B to psi(2S) X) = (3.08 +/- 0.12(stat.+syst.) +/- 0.13(theor.) +/- 0.42(BR[PDG])) 10^-3

The production rates of prompt and non-prompt $J/\psi$ and $\psi(2\mathrm{S})$ mesons are measured using 2.1 $fb^{-1}$ and 11.4 $fb^{-1}$ of data collected with the ATLAS experiment at the LHC, in proton-proton collisions at $\sqrt{s}=7$ and 8 TeV respectively. Production cross-sections for both prompt and non-prompt production sources, ratios of $\psi(2\mathrm{S})$ to $J/\psi$ production, and fractions of non-prompt to inclusive production for $J/\psi$ and $\psi(2\mathrm{S})$ are measured double-differentially as a function of meson $p_{T}$ and rapidity. These measurements are made in a restricted fiducial volume and also corrected for geometrical acceptance after which they are compared to a variety of theoretical predictions.

The nuclear modification factors of J/$\psi$ and $\psi$(2S) mesons are measured in PbPb collisions at a centre-of-mass energy per nucleon pair of $\sqrt{s_{\mathrm{NN}}} =$ 5.02 TeV. The analysis is based on PbPb and pp data samples collected by CMS at the LHC in 2015, corresponding to integrated luminosities of 464 $\mu$b$^{-1}$ and 28 pb$^{-1}$, respectively. The measurements are performed in the dimuon rapidity range of $|y| <$ 2.4 as a function of centrality, rapidity, and transverse momentum (p$_\mathrm{T}$) from p$_\mathrm{T}=$ 3 GeV/$c$ in the most forward region and up to 50 GeV/$c$. Both prompt and nonprompt (coming from b hadron decays) mesons are observed to be increasingly suppressed with centrality, with a magnitude similar to the one observed at $\sqrt{s_{\mathrm{NN}}}=$ 2.76 TeV for the two J/$\psi$ meson components. No dependence on rapidity is observed for either prompt or nonprompt J/$\psi$ mesons. An indication of a lower prompt J/$\psi$ meson suppression at p$_\mathrm{T} >$ 25 GeV/$c$ is seen with respect to that observed at intermediate p$_\mathrm{T}$. The prompt $\psi$(2S) meson yield is found to be more suppressed than that of the prompt J/$\psi$ mesons in the entire p$_\mathrm{T}$ range.

The polarizations of prompt J/psi and psi(2S) mesons are measured in proton-proton collisions at sqrt(s) = 7 TeV, using a dimuon data sample collected by the CMS experiment at the LHC, corresponding to an integrated luminosity of 4.9 inverse femtobarns. The prompt J/psi and psi(2S) polarization parameters lambda[theta], lambda[phi], and lambda[theta,phi], as well as the frame-invariant quantity lambda(tilde), are measured from the dimuon decay angular distributions in three different polarization frames. The J/psi results are obtained in the transverse momentum range 14 < pt < 70 GeV, in the rapidity intervals abs(y) < 0.6 and 0.6 < abs(y) < 1.2. The corresponding psi(2S) results cover 14 < pt < 50 GeV and include a third rapidity bin, 1.2 < abs(y) < 1.5. No evidence of large transverse or longitudinal polarizations is seen in these kinematic regions, which extend much beyond those previously explored.

The double-differential cross sections of promptly produced J/psi and psi(2S) mesons are measured in pp collisions at sqrt(s) = 7 TeV, as a function of transverse momentum pt and absolute rapidity abs(y). The analysis uses J/psi and psi(2S) dimuon samples collected by CMS, corresponding to integrated luminosities of 4.55 and 4.90 inverse femtobarns, respectively. The results are based on a two-dimensional analysis of the dimuon invariant mass and decay length, and extend to pt = 120 and 100 GeV for the J/psi and psi(2S), respectively, when integrated over the interval abs(y) < 1.2. The ratio of the psi(2S) to J/psi cross sections is also reported for abs(y) < 1.2, over the range 10 < pt < 100 GeV. These are the highest pt values for which the cross sections and ratio have been measured.

The relative modification of the prompt psi(2S) and J/psi yields from pp to PbPb collisions, at the center of mass energy of 5.02 TeV per nucleon pair, is presented. The analysis is based on pp and PbPb data samples collected by the CMS experiment at the LHC in 2015, corresponding to integrated luminosities of 28.0 inverse picobarns and 464 inverse microbarns, respectively. The double ratio of measured yields of prompt charmonia reconstructed through their decays into muon pairs, (N[psi(2S)]/N[J/psi])[PbPb] / (N[psi(2S)]/N[J/psi])[pp], is determined as a function of PbPb collision centrality and charmonium transverse momentum pt, in two kinematic intervals: abs(y) < 1.6 covering 6.5 < pt < 30 GeV/c and 1.6 < abs(y) < 2.4 covering 3 < pt < 30 GeV/c. The centrality-integrated double ratios are 0.36 +/- 0.08 (stat) +/-0.05 (syst) in the first interval and 0.24 +/- 0.22 (stat) +/- 0.09 (syst) in the second. The double ratio is lower than unity in all the measured bins, suggesting that the psi(2S) yield is more suppressed than the J/psi yield in the explored phase space.

The ratio between the prompt psi(2S) and J/psi yields, reconstructed via their decays into muon pairs, is measured in PbPb and pp collisions at sqrt(s[NN]) = 2.76 TeV. The analysis is based on PbPb and pp data samples collected by CMS at the LHC, corresponding to integrated luminosities of 150 inverse microbarns and 5.4 inverse picobarns, respectively. The double ratio of measured yields, (N[psi(2S)]/N[J/psi])[PbPb] / (N[psi(2S)]/ N[J/psi])[pp], is computed in three PbPb collision centrality bins and two kinematic ranges: one at midrapidity, abs(y) < 1.6, covering the transverse momentum range 6.5 < pt < 30 GeV/c, and the other at forward rapidity, 1.6 < abs(y) < 2.4, extending to lower pt values, 3 < pt < 30 GeV/c. The centrality-integrated double ratio changes from 0.45 +/- 0.13 (stat) +/- 0.07 (syst) in the first range to 1.67 +/- 0.34 (stat) +/- 0.27 (syst) in the second. This difference is most pronounced in the most central collisions.