We present measurements of $e^+e^-$ production at midrapidity in Au$+$Au collisions at $\sqrt{s_{_{NN}}}$ = 200 GeV. The invariant yield is studied within the PHENIX detector acceptance over a wide range of mass ($m_{ee} <$ 5 GeV/$c^2$) and pair transverse momentum ($p_T$ $<$ 5 GeV/$c$), for minimum bias and for five centrality classes. The \ee yield is compared to the expectations from known sources. In the low-mass region ($m_{ee}=0.30$--0.76 GeV/$c^2$) there is an enhancement that increases with centrality and is distributed over the entire pair \pt range measured. It is significantly smaller than previously reported by the PHENIX experiment and amounts to $2.3\pm0.4({\rm stat})\pm0.4({\rm syst})\pm0.2^{\rm model}$ or to $1.7\pm0.3({\rm stat})\pm0.3({\rm syst})\pm0.2^{\rm model}$ for minimum bias collisions when the open-heavy-flavor contribution is calculated with {\sc pythia} or {\sc mc@nlo}, respectively. The inclusive mass and $p_T$ distributions as well as the centrality dependence are well reproduced by model calculations where the enhancement mainly originates from the melting of the $\rho$ meson resonance as the system approaches chiral symmetry restoration. In the intermediate-mass region ($m_{ee}$ = 1.2--2.8 GeV/$c^2$), the data hint at a significant contribution in addition to the yield from the semileptonic decays of heavy-flavor mesons.

The differential cross section for the production of direct photons in p+p collisions at sqrt(s)=200 GeV at midrapidity was measured in the PHENIX detector at the Relativistic Heavy Ion Collider. Inclusive-direct photons were measured in the transverse-momentum range from 5.5--25 GeV/c, extending the range beyond previous measurements. Event structure was studied with an isolation criterion. Next-to-leading-order perturbative-quantum-chromodynamics calculations give a good description of the spectrum. When the cross section is expressed versus x_T, the PHENIX data are seen to be in agreement with measurements from other experiments at different center-of-mass energies.

The second Fourier component v_2 of the azimuthal anisotropy with respect to the reaction plane was measured for direct photons at midrapidity and transverse momentum (p_T) of 1--13 GeV/c in Au+Au collisions at sqr(s_NN)=200 GeV. Previous measurements of this quantity for hadrons with p_T < 6 GeV/c indicate that the medium behaves like a nearly perfect fluid, while for p_T > 6 GeV/c a reduced anisotropy is interpreted in terms of a path-length dependence for parton energy loss. In this measurement with the PHENIX detector at the Relativistic Heavy Ion Collider we find that for p_T > 4 GeV/c the anisotropy for direct photons is consistent with zero, as expected if the dominant source of direct photons is initial hard scattering. However, in the p_T < 4 GeV/c region dominated by thermal photons, we find a substantial direct photon v_2 comparable to that of hadrons, whereas model calculations for thermal photons in this kinematic region significantly underpredict the observed v_2.

We report on charmonium measurements [J/psi(1S), psi'(2S), and chi_c(1P)] in p+p collisions at sqrt(s)=200 GeV. We find that the fraction of J/psi coming from the feed-down decay of psi' and chi_c in the midrapidity region ($|\eta|<0.35$) is 9.6+/-2.4% and 32+/-9%, respectively. We also report new, higher statistics p_T and rapidity dependencies of the J/psi yield via dielectron decay in the same midrapidity range and at forward rapidity (1.2<|eta|<2.4) via dimuon decay. These results are compared with measurements from other experiments and discussed in the context of current charmonium production models.

We have measured direct photons for $p_T<5~$GeV/$c$ in minimum bias and 0\%--40\% most central events at midrapidity for Cu$+$Cu collisions at $\sqrt{s_{_{NN}}}=200$ GeV. The $e^{+}e^{-}$ contribution from quasi-real direct virtual photons has been determined as an excess over the known hadronic contributions in the $e^{+}e^{-}$ mass distribution. A clear enhancement of photons over the binary scaled $p$$+$$p$ fit is observed for $p_T<4$ GeV/$c$ in Cu$+$Cu data. The $p_T$ spectra are consistent with the Au$+$Au data covering a similar number of participants. The inverse slopes of the exponential fits to the excess after subtraction of the $p$$+$$p$ baseline are 285$\pm$53(stat)$\pm$57(syst)~MeV/$c$ and 333$\pm$72(stat)$\pm$45(syst)~MeV/$c$ for minimum bias and 0\%--40\% most central events, respectively. The rapidity density, $dN/dy$, of photons demonstrates the same power law as a function of $dN_{\rm ch}/d\eta$ observed in Au$+$Au at the same collision energy.

We present inclusive charged hadron elliptic flow v_2 measured over the pseudorapidity range |\eta| < 0.35 in Au+Au collisions at sqrt(s_NN) = 200 GeV. Results for v_2 are presented over a broad range of transverse momentum (p_T = 0.2-8.0 GeV/c) and centrality (0-60%). In order to study non-flow effects that are not correlated with the reaction plane, as well as the fluctuations of v_2, we compare two different analysis methods: (1) event plane method from two independent sub-detectors at forward (|\eta| = 3.1-3.9) and beam (|\eta| > 6.5) pseudorapidities and (2) two-particle cumulant method extracted using correlations between particles detected at midrapidity. The two event-plane results are consistent within systematic uncertainties over the measured p_T and in centrality 0-40%. There is at most 20% difference of the v_2 between the two event plane methods in peripheral (40-60%) collisions. The comparisons between the two-particle cumulant results and the standard event plane measurements are discussed.

Fast parton probes produced by hard scattering and embedded within collisions of large nuclei have shown that partons suffer large energy loss and that the produced medium may respond collectively to the lost energy. We present measurements of neutral pion trigger particles at transverse momenta p^t_T = 4-12 GeV/c and associated charged hadrons (p^a_T = 0.5-7 GeV/c) as a function of relative azimuthal angle Delta Phi at midrapidity in Au+Au and p+p collisions at sqrt(s_NN) = 200 GeV. These data lead to two major observations. First, the relative angular distribution of low momentum hadrons, whose shape modification has been interpreted as a medium response to parton energy loss, is found to be modified only for p^t_T &lt; 7 GeV/c. At higher p^t_T, the data are consistent with unmodified or very weakly modified shapes, even for the lowest measured p^a_T. This observation presents a quantitative challenge to medium response scenarios. Second, the associated yield of hadrons opposite to the trigger particle in Au+Au relative to that in p+p (I_AA) is found to be suppressed at large momentum (IAA ~ 0.35-0.5), but less than the single particle nuclear modification factor (R_AA ~0.2).

Measurements of anisotropic flow Fourier coefficients ($v_n$) for inclusive charged particles and identified hadrons $\pi^{\pm}$, $K^{\pm}$, $p$, and $\bar{p}$ produced at midrapidity in Cu+Au collisions at $\sqrt{s_{_{NN}}}=200$ GeV are presented. The data were collected in 2012 by the PHENIX experiment at the Relativistic Heavy Ion Collider (RHIC). The particle azimuthal distributions with respect to different order symmetry planes $\Psi_n$, for $n$~=~1, 2, and 3 are studied as a function of transverse momentum $p_T$ over a broad range of collisions centralities. Mass ordering, as expected from hydrodynamic flow, is observed for all three harmonics. The charged-particle results are compared to hydrodynamical and transport model calculations. We also compare these Cu$+$Au results with those in Cu$+$Cu and Au$+$Au collisions at the same $\sqrt{s_{_{NN}}}$, and find that the $v_2$ and $v_3$, as a function of transverse momentum, follow a common scaling with $1/(\varepsilon_n N_{\rm part}^{1/3})$.

We report the measurement of the transverse momentum dependence of inclusive J/psi polarization in p+p collisions at sqrt(s)=200 GeV performed by the PHENIX Experiment at RHIC. The polarization is studied in the helicity, Gottfried-Jackson, and Collins-Soper frames for p_T < 5 GeV/c and |y| < 0.35. The J/psi polarization in the helicity and Gottfried-Jackson frames is consistent with zero for all transverse momenta, with a slight (1.8 sigma) trend towards longitudinal polarization for transverse momenta above 2 GeV/c. No conclusion is allowed due to the limited acceptance in the Collins-Soper frame and the uncertainties of the current data. The results are compared to observations for other collision systems and center of mass energies and to different quarkonia production models.

The PHENIX experiment has measured the spin alignment for inclusive $J/\psi\rightarrow e^{+}e^{-}$ decays in $p$+$p$ collisions at $\sqrt{s}=510$ GeV at midrapidity. The angular distributions have been measured in three different polarization frames, and the three decay angular coefficients have been extracted in a full two-dimensional analysis. Previously, PHENIX saw large longitudinal net polarization at forward rapidity at the same collision energy. This analysis at midrapidity, complementary to the previous PHENIX results, sees no sizable polarization in the measured transverse momentum range of $0.0<p_T<10.0$ GeV/$c$. The results are consistent with a previous one-dimensional analysis at midrapidity at $\sqrt{s}=200$ GeV. The transverse-momentum-dependent cross section for midrapidity $J/\psi$ production has additionally been measured, and after comparison to world data we find a simple logarithmic dependence of the cross section on $\sqrt{s}$.

The PHENIX experiment at the Relativistic Heavy Ion Collider has measured 2nd and 3rd order Fourier coefficients of the azimuthal distributions of direct photons emitted at midrapidity in Au$+$Au collisions at $\sqrt{s_{_{NN}}}=200$ GeV for various collision centralities. Combining two different analysis techniques, results were obtained in the transverse momentum range of $0.4<p_{T}<4.0$ GeV/$c$. At low $p_T$ the second-order coefficients, $v_2$, are similar to the ones observed in hadrons. Third order coefficients, $v_3$, are nonzero and almost independent of centrality. These new results on $v_2$ and $v_3$, combined with previously published results on yields, are compared to model calculations that provide yields and asymmetries in the same framework. Those models are challenged to explain simultaneously the observed large yield and large azimuthal anisotropies.

The PHENIX Collaboration at the Relativistic Heavy Ion Collider has measured open heavy flavor production in Cu$+$Cu collisions at $\sqrt{s_{_{NN}}}$=200 GeV through the measurement of electrons at midrapidity that originate from semileptonic decays of charm and bottom hadrons. In peripheral Cu$+$Cu collisions an enhanced production of electrons is observed relative to $p$$+$$p$ collisions scaled by the number of binary collisions. In the transverse momentum range from 1 to 5 GeV/$c$ the nuclear modification factor is $R_{AA}$$\sim$1.4. As the system size increases to more central Cu$+$Cu collisions, the enhancement gradually disappears and turns into a suppression. For $p_T>3$ GeV/$c$, the suppression reaches $R_{AA}$$\sim$0.8 in the most central collisions. The $p_T$ and centrality dependence of $R_{AA}$ in Cu$+$Cu collisions agree quantitatively with $R_{AA}$ in $d+$Au and Au$+$Au collisions, if compared at similar number of participating nucleons $\langle N_{\rm part} \rangle$.

We present measured J/psi production rates in d+Au collisions at sqrt(s_NN) = 200 GeV over a broad range of transverse momentum (p_T=0-14 GeV/c) and rapidity (-2.2<y<2.2). We construct the nuclear-modification factor R_dAu for these kinematics and as a function of collision centrality (related to impact parameter for the R_dAu collision). We find that the modification is largest for collisions with small impact parameters, and observe a suppression (R_dAu<1) for p_T<4 GeV/c at positive rapidities. At negative rapidity we observe a suppression for p_T<2 GeV/c then an enhancement (R_dAu>1) for p_T>2 GeV/c. The observed enhancement at negative rapidity has implications for the observed modification in heavy-ion collisions at high p_T.

We report $e^\pm-\mu^\mp$ pair yield from charm decay measured between midrapidity electrons ($|\eta|<0.35$ and $p_T>0.5$ GeV/$c$) and forward rapidity muons ($1.4<\eta<2.1$ and $p_T>1.0$ GeV/$c$) as a function of $\Delta\phi$ in both $p$$+$$p$ and in $d$+Au collisions at $\sqrt{s_{_{NN}}}=200$ GeV. Comparing the $p$$+$$p$ results with several different models, we find the results are consistent with a total charm cross section $\sigma_{c\bar{c}} =$ 538 $\pm$ 46 (stat) $\pm$ 197 (data syst) $\pm$ 174 (model syst) $\mu$b. These generators also indicate that the back-to-back peak at $\Delta\phi = \pi$ is dominantly from the leading order contributions (gluon fusion), while higher order processes (flavor excitation and gluon splitting) contribute to the yield at all $\Delta\phi$. We observe a suppression in the pair yield per collision in $d$+Au. We find the pair yield suppression factor for $2.7<\Delta\phi<3.2$ rad is $J_{dA}$ = 0.433 $\pm$ 0.087 (stat) $\pm$ 0.135 (syst), indicating cold nuclear matter modification of $c\bar{c}$ pairs.

We present results for three charmonia states (psi^prime, chi_c and J/psi) in d+Au collisions at |y|<0.35 and sqrt(s_NN)=200 GeV. We find that the modification of the psi^prime yield relative to that of the J/psi scales approximately with charged-particle multiplicity at midrapidity across p+A, d+Au, and A+A results from the Super Proton Synchrotron and the Relativistic Heavy Ion Collider. In large impact-parameter collisions we observe a similar suppression for the psi^prime and J/psi, while in small impact-parameter collisions the more weakly bound psi^prime is more strongly suppressed. Owing to the short time spent traversing the Au nucleus, the larger psi^prime suppression in central events is not explained by an increase of the nuclear absorption due to meson formation time effects.

Neutral pion transverse momentum (pT) spectra at mid-rapidity (|y| < 0.35) were measured in Cu+Cu collisions at \sqrt s_NN = 22.4, 62.4, and 200 GeV. Relative to pi -zero yields in p+p collisions scaled by the number of inelastic nucleon-nucleon collisions (Ncoll) at the respective energies, the pi-zero yields for pT \ge 2 GeV/c in central Cu+Cu collisions at 62.4 and 200 GeV are suppressed, whereas an enhancement is observed at 22.4 GeV. A comparison with a jet quenching model suggests that final state parton energy loss dominates in central Cu+Cu collisions at 62.4 GeV and 200 GeV, while the enhancement at 22.4 GeV is consistent with nuclear modifications in the initial state alone.

We report on event structure and double helicity asymmetry ($A_LL$) of jet production in longitudinally polarized p+p collisions at $\sqrt{s}$=200 GeV. Photons and charged particles were measured at midrapidity $|\eta| < 0.35$ with the requirement of a high-momentum ($>2$ GeV/$c$) photon in each event. Measured event structure is compared with {\sc pythia} and {\sc geant} simulations. The shape of jets and the underlying event were well reproduced at this collision energy. For the measurement of jet $A_{LL}$, photons and charged particles were clustered with a seed-cone algorithm to obtain the cluster $p_T$ sum ($p_T^{\rm reco}$). The effect of detector response and the underlying events on $p_T^{\rm reco}$ was evaluated with the simulation. The production rate of reconstructed jets is satisfactorily reproduced with the NLO pQCD jet production cross section. For $4 < p_T^{\rm reco} < 12$ GeV/$c$ with an average beam polarization of $< P > = 49%$ we measured $A_{LL} = -0.0014 \pm 0.0037^{\rm stat}$ at the lowest $p_T^{\rm reco}$ bin (4-5 GeV/$c$) and $-0.0181 \pm 0.0282^{\rm stat}$ at the highest $p_T^{\rm reco}$ bin (10-12 GeV/$c$) with a beam polarization scale error of 9.4% and a $\pT$ scale error of 10%. Jets in the measured $p_T^{\rm reco}$ range arise primarily from hard-scattered gluons with momentum fraction $0.02 < x < 0.3$ according to {\sc pythia}. The measured $A_{LL}$ is compared with predictions that assume various $\Delta G(x)$ distributions based on the GRSV parameterization. The present result imposes the limit $-1.1 < \int_{0.02}^{0.3}dx \Delta G(x, \mu^2 = 1 {\rm GeV}^2) < 0.4$ at 95% confidence level or $\int_{0.02}^{0.3}dx \Delta G(x, \mu^2 = 1 {\rm GeV}^2) < 0.5$ at 99% confidence level.

The PHENIX experiment at the Relativistic Heavy Ion Collider (RHIC) has performed systematic measurements of phi meson production in the K+K- decay channel at midrapidity in p+p, d+Au, Cu+Cu and Au+Au collisions at sqrt(S_NN)=200 GeV. Results are presented on the phi invariant yield and the nuclear modification factor R_AA for Au+Au and Cu+Cu, and R_dA for d+Au collisions, studied as a function of transverse momentum (1&lt;p_T&lt;7 GeV/c) and centrality. In central and mid-central Au+Au collisions, the R_AA of phi exhibits a suppression relative to expectations from binary scaled p+p results. The amount of suppression is smaller than that of the neutral pion and the eta meson in the intermediate p_T range (2--5 GeV/c); whereas at higher p_T the phi, pi^0, and eta show similar suppression. The baryon (protons and anti-protons) excess observed in central Au+Au collisions at intermediate p_T is not observed for the phi meson despite the similar mass of the proton and the phi. This suggests that the excess is linked to the number of constituent quarks rather than the hadron mass. The difference gradually disappears with decreasing centrality and for peripheral collisions the R_AA values for both particles are consistent with binary scaling. Cu+Cu collisions show the same yield and suppression as Au+Au collisions for the same number of N_part. The R_dA of phi shows no evidence for cold nuclear effects within uncertainties.

Unpolarized cross sections and double-helicity asymmetries of single-inclusive positive and negative charged hadrons at midrapidity from p+p collisions at sqrt(s)=62.4 GeV are presented. The PHENIX measurements for 1.0 < p_T < 4.5 GeV/c are consistent with perturbative QCD calculations at next-to-leading order in the strong coupling constant, alpha_s. Resummed pQCD calculations including terms with next-to-leading-log accuracy, yielding reduced theoretical uncertainties, also agree with the data. The double-helicity asymmetry, sensitive at leading order to the gluon polarization in a momentum-fraction range of 0.05 ~< x_gluon ~< 0.2, is consistent with recent global parameterizations disfavoring large gluon polarization.

We present an improved measurement of the double helicity asymmetry for pi^0 production in polarized proton-proton scattering at sqrt(s) = 200 GeV employing the PHENIX detector at the Relativistic Heavy Ion Collider (RHIC). The improvements to our previous measurement come from two main factors: Inclusion of a new data set from the 2004 RHIC run with higher beam polarizations than the earlier run and a recalibration of the beam polarization measurements, which resulted in reduced uncertainties and increased beam polarizations. The results are compared to a Next to Leading Order (NLO) perturbative Quantum Chromodynamics (pQCD) calculation with a range of polarized gluon distributions.

We present measurements of the transverse-momentum dependence of elliptic flow $v_2$ for identified pions and (anti)protons at midrapidity ($|\eta|<0.35$), in 0%--5% central $p$$+$Au and $^3$He$+$Au collisions at $\sqrt{s_{_{NN}}}=200$ GeV. When taken together with previously published measurements in $d$$+$Au collisions at $\sqrt{s_{_{NN}}}=200$ GeV, the results cover a broad range of small-collision-system multiplicities and intrinsic initial geometries. We observe a clear mass-dependent splitting of $v_2(p_{T})$ in $d$$+$Au and $^3$He$+$Au collisions, just as in large nucleus-nucleus ($A$$+$$A$) collisions, and a smaller splitting in $p$$+$Au collisions. Both hydrodynamic and transport model calculations successfully describe the data at low $p_T$ ($< 1.5$ GeV/$c$), but fail to describe various features at higher $p_T$. In all systems, the $v_2$ values follow an approximate quark-number scaling as a function of the hadron transverse kinetic energy per constituent quark($KE_T/n_q$), which was also seen previously in $A$$+$$A$ collisions.

Measurements of the anisotropy parameter v_2 of identified hadrons (pions, kaons, and protons) as a function of centrality, transverse momentum p_T, and transverse kinetic energy KE_T at midrapidity (|\eta|<0.35) in Au+Au collisions at sqrt(s_NN) = 200 GeV are presented. Pions and protons are identified up to p_T = 6 GeV/c, and kaons up to p_T = 4 GeV/c, by combining information from time-of-flight and aerogel Cherenkov detectors in the PHENIX Experiment. The scaling of v_2 with the number of valence quarks (n_q) has been studied in different centrality bins as a function of transverse momentum and transverse kinetic energy. A deviation from previously observed quark-number scaling is observed at large values of KE_T/n_q in noncentral Au+Au collisions (20--60%), but this scaling remains valid in central collisions (0--10%).

Measurements of transverse-single-spin asymmetries ($A_{N}$) in $p$$+$$p$ collisions at $\sqrt{s}=$62.4 and 200 GeV with the PHENIX detector at RHIC are presented. At midrapidity, $A_{N}$ is measured for neutral pion and eta mesons reconstructed from diphoton decay, and at forward rapidities, neutral pions are measured using both diphotons and electromagnetic clusters. The neutral-pion measurement of $A_{N}$ at midrapidity is consistent with zero with uncertainties a factor of 20 smaller than previous publications, which will lead to improved constraints on the gluon Sivers function. At higher rapidities, where the valence quark distributions are probed, the data exhibit sizable asymmetries. In comparison with previous measurements in this kinematic region, the new data extend the kinematic coverage in $\sqrt{s}$ and $p_T$, and it is found that the asymmetries depend only weakly on $\sqrt{s}$. The origin of the forward $A_{N}$ is presently not understood quantitatively. The extended reach to higher $p_T$ probes the transition between transverse momentum dependent effects at low $p_T$ and multi-parton dynamics at high $p_T$.

Asymmetric nuclear collisions of $p$$+$Al, $p$$+$Au, $d$$+$Au, and $^{3}$He$+$Au at $\sqrt{s_{_{NN}}}=200$ GeV provide an excellent laboratory for understanding particle production, as well as exploring interactions among these particles after their initial creation in the collision. We present measurements of charged hadron production $dN_{\rm ch}/d\eta$ in all such collision systems over a broad pseudorapidity range and as a function of collision multiplicity. A simple wounded quark model is remarkably successful at describing the full data set. We also measure the elliptic flow $v_{2}$ over a similarly broad pseudorapidity range. These measurements provide key constraints on models of particle emission and their translation into flow.