Measurements of the differential production cross-sections of prompt and non-prompt $J/\psi$ and $\psi(2$S$)$ mesons with transverse momenta between 8 and 360 GeV and rapidity in the range $|y|<2$ are reported. Furthermore, measurements of the non-prompt fractions of $J/\psi$ and $\psi(2$S$)$, and the prompt and non-prompt $\psi(2$S$)$-to-$J/\psi$ production ratios, are presented. The analysis is performed using 140 fb$^{-1}$ of $\sqrt{s}=13$ TeV $pp$ collision data recorded by the ATLAS detector at the LHC during the years 2015-2018.

The production cross-sections of $J/\psi$ mesons in proton-proton collisions at a centre-of-mass energy of $\sqrt{s}=5$ TeV are measured using a data sample corresponding to an integrated luminosity of $9.13\pm0.18~\text{pb}^{-1}$, collected by the LHCb experiment. The cross-sections are measured differentially as a function of transverse momentum, $p_{\text{T}}$, and rapidity, $y$, and separately for $J/\psi$ mesons produced promptly and from beauty hadron decays (nonprompt). With the assumption of unpolarised $J/\psi$ mesons, the production cross-sections integrated over the kinematic range $0<p_{\text{T}}<20~\text{GeV}/c$ and $2.0<y<4.5$ are $8.154\pm0.010\pm0.283~\mu\text{b}$ for prompt $J/\psi$ mesons and $0.820\pm0.003\pm0.034~\mu\text{b}$ for nonprompt $J/\psi$ mesons, where the first uncertainties are statistical and the second systematic. These cross-sections are compared with those at $\sqrt{s}=8$ TeV and $13$ TeV, and are used to update the measurement of the nuclear modification factor in proton-lead collisions for $J/\psi$ mesons at a centre-of-mass energy per nucleon pair of $\sqrt{s_{\text{NN}}}=5$ TeV. The results are compared with theoretical predictions.

We report on the inclusive J/$\psi$ production cross section measured at the CERN Large Hadron Collider in proton-proton collisions at a centre-of-mass energy $\sqrt{s}~=~13$ TeV. The J/$\psi$ mesons are reconstructed in the $\rm e^{+} e^{-}$ decay channel and the measurements are performed at midrapidity ($|y|<0.9$) in the transverse-momentum interval $0< p_{\rm T} <40$ GeV/$c$, using a minimum bias data sample corresponding to an integrated luminosity $L_{\text{int}} = 32.2~\text{nb}^{-1}$ and an Electromagnetic Calorimeter triggered data sample with $L_{\text{int}} = 8.3~\mathrm{pb}^{-1}$. The $p_{\rm T}$-integrated J/$\psi$ production cross section at midrapidity, computed using the minimum bias data sample, is $\text{d}\sigma/\text{d}y|_{y=0} = 8.97\pm0.24~(\text{stat})\pm0.48~(\text{syst})\pm0.15~(\text{lumi})~\mu\text{b}$. An approximate logarithmic dependence with the collision energy is suggested by these results and available world data, in agreement with model predictions. The integrated and $p_{\rm T}$-differential measurements are compared with measurements in pp collisions at lower energies and with several recent phenomenological calculations based on the non-relativistic QCD and Color Evaporation models.

The nuclear modification factors of J/$\psi$ and $\psi$(2S) mesons are measured in PbPb collisions at a centre-of-mass energy per nucleon pair of $\sqrt{s_{\mathrm{NN}}} =$ 5.02 TeV. The analysis is based on PbPb and pp data samples collected by CMS at the LHC in 2015, corresponding to integrated luminosities of 464 $\mu$b$^{-1}$ and 28 pb$^{-1}$, respectively. The measurements are performed in the dimuon rapidity range of $|y| <$ 2.4 as a function of centrality, rapidity, and transverse momentum (p$_\mathrm{T}$) from p$_\mathrm{T}=$ 3 GeV/$c$ in the most forward region and up to 50 GeV/$c$. Both prompt and nonprompt (coming from b hadron decays) mesons are observed to be increasingly suppressed with centrality, with a magnitude similar to the one observed at $\sqrt{s_{\mathrm{NN}}}=$ 2.76 TeV for the two J/$\psi$ meson components. No dependence on rapidity is observed for either prompt or nonprompt J/$\psi$ mesons. An indication of a lower prompt J/$\psi$ meson suppression at p$_\mathrm{T} >$ 25 GeV/$c$ is seen with respect to that observed at intermediate p$_\mathrm{T}$. The prompt $\psi$(2S) meson yield is found to be more suppressed than that of the prompt J/$\psi$ mesons in the entire p$_\mathrm{T}$ range.

The modification of the production of $J/\psi$, $\psi(\mathrm{2S})$, and $\mit{\Upsilon}(n\mathrm{S})$ ($n = 1, 2, 3$) in $p$+Pb collisions with respect to their production in $pp$ collisions has been studied. The $p$+Pb and $pp$ datasets used in this paper correspond to integrated luminosities of $28$ $\mathrm{nb}^{-1}$ and $25$ $\mathrm{pb}^{-1}$ respectively, collected in 2013 and 2015 by the ATLAS detector at the LHC, both at a centre-of-mass energy per nucleon pair of 5.02 TeV. The quarkonium states are reconstructed in the dimuon decay channel. The yields of $J/\psi$ and $\psi(\mathrm{2S})$ are separated into prompt and non-prompt sources. The measured quarkonium differential cross sections are presented as a function of rapidity and transverse momentum, as is the nuclear modification factor, $R_{p\mathrm{Pb}}$ for $J/\psi$ and $\mit{\Upsilon}(\mathrm{1S})$. No significant modification of the $J/\psi$ production is observed while $\mit{\Upsilon}(\mathrm{1S})$ production is found to be suppressed at low transverse momentum in $p$+Pb collisions relative to $pp$ collisions. The production of excited charmonium and bottomonium states is found to be suppressed relative to that of the ground states in central $p$+Pb collisions.

The relative modification of the prompt psi(2S) and J/psi yields from pp to PbPb collisions, at the center of mass energy of 5.02 TeV per nucleon pair, is presented. The analysis is based on pp and PbPb data samples collected by the CMS experiment at the LHC in 2015, corresponding to integrated luminosities of 28.0 inverse picobarns and 464 inverse microbarns, respectively. The double ratio of measured yields of prompt charmonia reconstructed through their decays into muon pairs, (N[psi(2S)]/N[J/psi])[PbPb] / (N[psi(2S)]/N[J/psi])[pp], is determined as a function of PbPb collision centrality and charmonium transverse momentum pt, in two kinematic intervals: abs(y) < 1.6 covering 6.5 < pt < 30 GeV/c and 1.6 < abs(y) < 2.4 covering 3 < pt < 30 GeV/c. The centrality-integrated double ratios are 0.36 +/- 0.08 (stat) +/-0.05 (syst) in the first interval and 0.24 +/- 0.22 (stat) +/- 0.09 (syst) in the second. The double ratio is lower than unity in all the measured bins, suggesting that the psi(2S) yield is more suppressed than the J/psi yield in the explored phase space.

The nuclear modification factor RAA and the azimuthal anisotropy coefficient v[2] of prompt and nonprompt (i.e. those from decays of b hadrons) J/psi mesons, measured from PbPb and pp collisions at sqrt(s[NN]) = 2.76 TeV at the LHC, are reported. The results are presented in several event centrality intervals and several kinematic regions, for transverse momenta pt > 6.5 GeV/c and rapidity abs(y) < 2.4, extending down to pt = 3 GeV/c in the 1.6 < abs(y) < 2.4 range. The v[2] of prompt J/psi is found to be nonzero, but with no strong dependence on centrality, rapidity, or pt over the full kinematic range studied. The measured v[2] of nonprompt J/psi is consistent with zero. The RAA of prompt J/psi exhibits a suppression that increases from peripheral to central collisions but does not vary as a function of either y or pt in the fiducial range. The nonprompt J/psi RAA shows a suppression which becomes stronger as rapidity or pt increase. The v[2] and nuclear suppression of open and hidden charm, and of open charm and beauty, are compared.

We report the double helicity asymmetry, $A_{LL}^{J/\psi}$, in inclusive $J/\psi$ production at forward rapidity as a function of transverse momentum $p_T$ and rapidity $|y|$. The data analyzed were taken during $\sqrt{s}=510$ GeV longitudinally polarized $p

The production rates of prompt and non-prompt $J/\psi$ and $\psi(2\mathrm{S})$ mesons are measured using 2.1 $fb^{-1}$ and 11.4 $fb^{-1}$ of data collected with the ATLAS experiment at the LHC, in proton-proton collisions at $\sqrt{s}=7$ and 8 TeV respectively. Production cross-sections for both prompt and non-prompt production sources, ratios of $\psi(2\mathrm{S})$ to $J/\psi$ production, and fractions of non-prompt to inclusive production for $J/\psi$ and $\psi(2\mathrm{S})$ are measured double-differentially as a function of meson $p_{T}$ and rapidity. These measurements are made in a restricted fiducial volume and also corrected for geometrical acceptance after which they are compared to a variety of theoretical predictions.

The double-differential cross sections of promptly produced J/psi and psi(2S) mesons are measured in pp collisions at sqrt(s) = 7 TeV, as a function of transverse momentum pt and absolute rapidity abs(y). The analysis uses J/psi and psi(2S) dimuon samples collected by CMS, corresponding to integrated luminosities of 4.55 and 4.90 inverse femtobarns, respectively. The results are based on a two-dimensional analysis of the dimuon invariant mass and decay length, and extend to pt = 120 and 100 GeV for the J/psi and psi(2S), respectively, when integrated over the interval abs(y) < 1.2. The ratio of the psi(2S) to J/psi cross sections is also reported for abs(y) < 1.2, over the range 10 < pt < 100 GeV. These are the highest pt values for which the cross sections and ratio have been measured.