$J/\psi$ invariant yield as a function of $p_T$ for each centrality at $|y|$ < 0.35. The type C systematic uncertainty for each distribution is given as a percentage in the legend. Type A represents uncertainties that are uncorrelated from point to point, Type B represents uncertainties that are correlated from point to point, and Type C represents uncertainties in the overall normalization.

$J/\psi$ invariant yield as a function of $p_T$ for each centrality at $|y|$ < 0.35. The type C systematic uncertainty for each distribution is given as a percentage in the legend. Type A represents uncertainties that are uncorrelated from point to point, Type B represents uncertainties that are correlated from point to point, and Type C represents uncertainties in the overall normalization.

$J/\psi$ invariant yield as a function of $p_T$ for each centrality at $|y|$ < 0.35. The type C systematic uncertainty for each distribution is given as a percentage in the legend. Type A represents uncertainties that are uncorrelated from point to point, Type B represents uncertainties that are correlated from point to point, and Type C represents uncertainties in the overall normalization.

$J/\psi$ invariant yield as a function of $p_T$ for each centrality at $|y|$ < 0.35. The type C systematic uncertainty for each distribution is given as a percentage in the legend. Type A represents uncertainties that are uncorrelated from point to point, Type B represents uncertainties that are correlated from point to point, and Type C represents uncertainties in the overall normalization.

$J/\psi$ invariant yield as a function of $p_T$ for each centrality for −2.2 < $y$ < −1.2. The type C systematic uncertainty for each distribution is given as a percentage in the legend. Type A represents uncertainties that are uncorrelated from point to point, Type B represents uncertainties that are correlated from point to point, and Type C represents uncertainties in the overall normalization.

$J/\psi$ invariant yield as a function of $p_T$ for each centrality for −2.2 < $y$ < −1.2. The type C systematic uncertainty for each distribution is given as a percentage in the legend. Type A represents uncertainties that are uncorrelated from point to point, Type B represents uncertainties that are correlated from point to point, and Type C represents uncertainties in the overall normalization.

$J/\psi$ invariant yield as a function of $p_T$ for each centrality for −2.2 < $y$ < −1.2. The type C systematic uncertainty for each distribution is given as a percentage in the legend. Type A represents uncertainties that are uncorrelated from point to point, Type B represents uncertainties that are correlated from point to point, and Type C represents uncertainties in the overall normalization.

$J/\psi$ invariant yield as a function of $p_T$ for each centrality for −2.2 < $y$ < −1.2. The type C systematic uncertainty for each distribution is given as a percentage in the legend. Type A represents uncertainties that are uncorrelated from point to point, Type B represents uncertainties that are correlated from point to point, and Type C represents uncertainties in the overall normalization.

$J/\psi$ invariant yield as a function of $p_T$ for each centrality for −2.2 < $y$ < −1.2. The type C systematic uncertainty for each distribution is given as a percentage in the legend. Type A represents uncertainties that are uncorrelated from point to point, Type B represents uncertainties that are correlated from point to point, and Type C represents uncertainties in the overall normalization.

$J/\psi$ invariant yield as a function of $p_T$ for each centrality for −2.2 < $y$ < −1.2. The type C systematic uncertainty for each distribution is given as a percentage in the legend. Type A represents uncertainties that are uncorrelated from point to point, Type B represents uncertainties that are correlated from point to point, and Type C represents uncertainties in the overall normalization.

$J/\psi$ invariant yield as a function of $p_T$ for each centrality for −2.2 < $y$ < −1.2. The type C systematic uncertainty for each distribution is given as a percentage in the legend. Type A represents uncertainties that are uncorrelated from point to point, Type B represents uncertainties that are correlated from point to point, and Type C represents uncertainties in the overall normalization.

$J/\psi$ invariant yield as a function of $p_T$ for each centrality for −2.2 < $y$ < −1.2. The type C systematic uncertainty for each distribution is given as a percentage in the legend. Type A represents uncertainties that are uncorrelated from point to point, Type B represents uncertainties that are correlated from point to point, and Type C represents uncertainties in the overall normalization.

$J/\psi$ nuclear modification factor, $R_{dAu}$, as a function of $p_T$ for (a) backward rapidity 0–100% centrality integrated $d$+Au collisions. Type A represents uncertainties that are uncorrelated from point to point, Type B represents uncertainties that are correlated from point to point, and Type C represents uncertainties in the overall normalization.

$J/\psi$ nuclear modification factor, $R_{dAu}$, as a function of $p_T$ for (b) midrapidity 0–100% centrality integrated $d$+Au collisions. Type A represents uncertainties that are uncorrelated from point to point, Type B represents uncertainties that are correlated from point to point, and Type C represents uncertainties in the overall normalization.

$J/\psi$ nuclear modification factor, $R_{dAu}$, as a function of $p_T$ for (c) forward rapidity 0–100% centrality integrated $d$+Au collisions. Type A represents uncertainties that are uncorrelated from point to point, Type B represents uncertainties that are correlated from point to point, and Type C represents uncertainties in the overall normalization.

$J/\psi$ —> $\mu^+\mu^-$ $R_{dAu}$, as a function of $p_T$ for a) central events at −2.2 < $y$ < −1.2. Type A represents uncertainties that are uncorrelated from point to point, Type B represents uncertainties that are correlated from point to point, and Type C represents uncertainties in the overall normalization.

$J/\psi$ —> $\mu^+\mu^-$ $R_{dAu}$, as a function of $p_T$ for b) midcentral events at −2.2 < $y$ < −1.2. Type A represents uncertainties that are uncorrelated from point to point, Type B represents uncertainties that are correlated from point to point, and Type C represents uncertainties in the overall normalization.

$J/\psi$ —> $\mu^+\mu^-$ $R_{dAu}$, as a function of $p_T$ for c) midperipheral events at −2.2 < $y$ < −1.2. Type A represents uncertainties that are uncorrelated from point to point, Type B represents uncertainties that are correlated from point to point, and Type C represents uncertainties in the overall normalization.

$J/\psi$ —> $\mu^+\mu^-$ $R_{dAu}$, as a function of $p_T$ for d) peripheral events at −2.2 < $y$ < −1.2. The 60–88% $R_{dAu}$ point at $p_T$ = 5.75 GeV/$c$ has been left off the figure, as it is above the plotted range and has very large uncertainties, however it is included in the table. Type A represents uncertainties that are uncorrelated from point to point, Type B represents uncertainties that are correlated from point to point, and Type C represents uncertainties in the overall normalization.

$J/\psi$ —> $e^+e^-$ $R_{dAu}$, as a function of $p_T$ for a) central, b) midcentral, c) midperipheral, and d) peripheral events at $|y|$ < 0.35. Type A represents uncertainties that are uncorrelated from point to point, Type B represents uncertainties that are correlated from point to point, and Type C represents uncertainties in the overall normalization.

$J/\psi$ —> $\mu^+\mu^-$ $R_{dAu}$, as a function of $p_T$ for a) central events at 1.2 < $y$ < 2.2. Type A represents uncertainties that are uncorrelated from point to point, Type B represents uncertainties that are correlated from point to point, and Type C represents uncertainties in the overall normalization.

$J/\psi$ —> $\mu^+\mu^-$ $R_{dAu}$, as a function of $p_T$ for b) midcentral events at 1.2 < $y$ < 2.2. Type A represents uncertainties that are uncorrelated from point to point, Type B represents uncertainties that are correlated from point to point, and Type C represents uncertainties in the overall normalization.

$J/\psi$ —> $\mu^+\mu^-$ $R_{dAu}$, as a function of $p_T$ for c) midperipheral events at 1.2 < $y$ < 2.2. Type A represents uncertainties that are uncorrelated from point to point, Type B represents uncertainties that are correlated from point to point, and Type C represents uncertainties in the overall normalization.

$J/\psi$ —> $\mu^+\mu^-$ $R_{dAu}$, as a function of $p_T$ for d) peripheral events at 1.2 < $y$ < 2.2. Type A represents uncertainties that are uncorrelated from point to point, Type B represents uncertainties that are correlated from point to point, and Type C represents uncertainties in the overall normalization.

Ratios of $p_{T}$ distributions within 0.5 $<$ $|\eta|$ $<$ 1 to those within $|\eta|$$<$ 0.5 in various centrality bins. Errors are combined statistical and systematic.

dN/d$\eta$ distributions for $p_{T}$ $>$ 2 GeV/c and -1 $<$ $\eta$ $<$ 1 scaled by $N_{bin}$ and divided by the NN reference

Ratio of charged hadron yields within $|\eta|$ $<$ 1 for Au+Au relative to the NN reference, scaled by $N_{part}$/2 as a function of centrality for a $p_{T}$ bin at $p_{T}$ = 2.05 GeV/c

Participant scaling exponent v of charged hadron yields as a function of $p_{T}$ within $|\eta|$ $<$ 1

Ratio of truncated mean $p_{T}$ in $p_{T}$ $>$ $p_{T}^{cut}$ within $|\eta|$$<$1 as a function of $p_{T}^{cut}$ for central and peripheral collisions.

Binary scaling fraction in $p_{T}$ $>$ $p_{T}^{cut}$ within $|\eta|$ $<$ 1 as a function of centrality for selected $p_{T}^{cut}$. For $p_{T}^{cut}$ $>$ 2 GeV/c, the fraction F decreases with centrality.